Deconvolution summary for DETBK037GFN (ENCSR037GFN )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
gastroesophageal sphincter
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Reference sample

Status:
Released
Pair type:
Different donor(s), same tissue
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
peak calls of the bulk library DETBK037GFN 1 DETFL320WXW Released
alignments of the bulk library DETBK037GFN 1 DETFL643XXF Released
fragments DETRF215BTH - DETFL162LPO Released
cell type data DETRF215BTH - DETFL476SQE Released

File type Cell type File accession File status
deconvoluted plus strand signal fibroblast DETFL147XIV Released
deconvoluted plus strand signal myofibroblast DETFL084JCA Released
deconvoluted plus strand signal T cell DETFL592QDN Released
deconvoluted plus strand signal vascular smooth muscle cell DETFL601SGP Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC