Deconvolution summary for DETBK069EGE (ENCSR069EGE )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K27ac Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
transverse colon
Donor:
Male adult (54 years) - DETDR451RUA / ENCDO451RUA
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Male adult (54 years) - DETDR451RUA / ENCDO451RUA
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK069EGE 1 DETFL157FAJ Released
peak calls of the bulk library DETBK069EGE 1, 3 DETFL368OSK Released
alignments of the bulk library DETBK069EGE 3 DETFL960JEY Released
fragments DETRF349XKD - DETFL551UBJ Released
cell type data DETRF349XKD - DETFL588CVI Released

File type Cell type File accession File status
deconvoluted plus strand signal enterocyte absorptive cell DETFL442RPF Released
deconvoluted plus strand signal macrophage DETFL722HFE Released
deconvoluted plus strand signal T cell DETFL756XAP Released
deconvoluted plus strand signal vascular smooth muscle cell DETFL808ARJ Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
Loading experiment context...
Results
Cell type Marker gene LFC