Deconvolution summary for DETBK493MQY (ENCSR493MQY )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me1 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
stomach
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Deconvolution

File type Experiment Replicate File accession File status
peak calls of the bulk library DETBK493MQY 1 DETFL475EJU Released
alignments of the bulk library DETBK493MQY 1 DETFL624DJZ Released
fragments DETRF266ZPZ - DETFL206MHF Released
cell type data DETRF266ZPZ - DETFL484AHV Released

File type Cell type File accession File status
deconvoluted plus strand signal gastric chief cell DETFL127FKT Released
deconvoluted plus strand signal smooth muscle cell DETFL089VPE Released
deconvoluted plus strand signal T cell DETFL697VHR Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC