Deconvolution summary for DETBK499VCQ (ENCSR499VCQ )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me1 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
gastrocnemius medialis
Donor:
Female adult (51 years) - DETDR271OUW / ENCDO271OUW
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (51 years) - DETDR271OUW / ENCDO271OUW
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK499VCQ 1 DETFL016EAI Released
peak calls of the bulk library DETBK499VCQ 1, 2 DETFL445YRE Released
alignments of the bulk library DETBK499VCQ 2 DETFL004FPB Released
fragments DETRF023FME - DETFL223JJZ Released
cell type data DETRF023FME - DETFL490XYV Released

File type Cell type File accession File status
deconvoluted plus strand signal endothelial cell DETFL062TFQ Released
deconvoluted plus strand signal basal epithelial cell DETFL378BJP Released
deconvoluted plus strand signal type 1 skeletal myocyte DETFL300TVQ Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC