Deconvolution summary for DETBK554XXQ (ENCSR554XXQ )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me1 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
right lobe of liver
Donor:
Female child (16 years) - DETDR575EGL / ENCDO575EGL
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female child (16 years) - DETDR575EGL / ENCDO575EGL
Deconvolution

File type Experiment Replicate File accession File status
peak calls of the bulk library DETBK554XXQ 1 DETFL044OKT Released
alignments of the bulk library DETBK554XXQ 1 DETFL513VDQ Released
fragments DETRF402PKA - DETFL746EWS Released
cell type data DETRF402PKA - DETFL014NPL Released

File type Cell type File accession File status
deconvoluted plus strand signal cholangiocyte DETFL634YQW Released
deconvoluted plus strand signal hepatocyte DETFL329SGW Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC