Deconvolution summary for DETBK785DJD (ENCSR785DJD )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
gastrocnemius medialis
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK785DJD 1 DETFL301NCN Released
peak calls of the bulk library DETBK785DJD 1 DETFL340QGE Released
fragments DETRF244GZL - DETFL982BFF Released
cell type data DETRF244GZL - DETFL082UMA Released

File type Cell type File accession File status
deconvoluted plus strand signal luminal epithelial cell DETFL380VHR Released
deconvoluted plus strand signal macrophage DETFL874XYA Released
deconvoluted plus strand signal T cell DETFL596MOI Released
deconvoluted plus strand signal vascular smooth muscle cell DETFL665XOV Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
Loading experiment context...
Results
Cell type Marker gene LFC