Deconvolution summary for DETBK791BWS (ENCSR791BWS )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
lower lobe of left lung
Donor:
Female adult (59 years) - DETDR856ZOJ / ENCDO856ZOJ
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (59 years) - DETDR856ZOJ / ENCDO856ZOJ
Deconvolution

File type Experiment Replicate File accession File status
peak calls of the bulk library DETBK791BWS 1 DETFL143ASW Released
alignments of the bulk library DETBK791BWS 1 DETFL240BDC Released
fragments DETRF592WYM - DETFL181DYV Released
cell type data DETRF592WYM - DETFL161GIR Released

File type Cell type File accession File status
deconvoluted plus strand signal adventitial fibroblast DETFL926OMC Released
deconvoluted plus strand signal general capillary cell DETFL604GPO Released
deconvoluted plus strand signal alveolar fibroblast DETFL589CVQ Released
deconvoluted plus strand signal macrophage DETFL685TAS Released
deconvoluted plus strand signal alveolar type 1 cell DETFL047HMZ Released
deconvoluted plus strand signal alveolar type 2 cell DETFL163ICL Released
deconvoluted plus strand signal vein endothelial cell DETFL034BVO Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC