Deconvolution summary for DETBK793IKH (ENCSR793IKH )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
sigmoid colon
Donor:
Female adult (51 years) - DETDR271OUW / ENCDO271OUW
Reference sample

Status:
Released
Pair type:
Different donor(s), same tissue
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Deconvolution

File type Experiment Replicate File accession File status
peak calls of the bulk library DETBK793IKH 1 DETFL755OXH Released
alignments of the bulk library DETBK793IKH 1 DETFL770ALB Released
fragments DETRF367GKP - DETFL010JFQ Released
cell type data DETRF367GKP - DETFL377GVQ Released

File type Cell type File accession File status
deconvoluted plus strand signal fibroblast DETFL205RAV Released
deconvoluted plus strand signal macrophage DETFL724SDJ Released
deconvoluted plus strand signal Schwann cell DETFL910TPL Released
deconvoluted plus strand signal smooth muscle cell DETFL227ZXQ Released
deconvoluted plus strand signal vascular smooth muscle cell DETFL850XUS Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC