Deconvolution summary for DETBK850RVA (ENCSR850RVA )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me1 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
tibial nerve
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
peak calls of the bulk library DETBK850RVA 1 DETFL090FEE Released
alignments of the bulk library DETBK850RVA 1 DETFL513KEZ Released
fragments DETRF726QTF - DETFL462EMP Released
cell type data DETRF726QTF - DETFL424KFQ Released

File type Cell type File accession File status
deconvoluted plus strand signal endothelial cell DETFL177UJX Released
deconvoluted plus strand signal basal epithelial cell DETFL507TUL Released
deconvoluted plus strand signal fibroblast DETFL672RHZ Released
deconvoluted plus strand signal macrophage DETFL819GIS Released
deconvoluted plus strand signal Schwann cell DETFL523RYD Released
deconvoluted plus strand signal smooth muscle cell DETFL411VHO Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC