DeepDETAILS Reference Samples

Reference samples provide the annotated single-cell and single-nucleus ATAC-seq profiles used to assign bulk regulatory signals to specific cell types.


snATAC-seq in heart left ventricle (DETRF556UHL / ENCSR556UHL)

Male adult (61 years) - DETDR808ASZ / ENCDO808ASZ

Annotated reference cell types:

  • cardiac muscle cell
  • fibroblast of cardiac tissue
  • cardiac endothelial cell
  • smooth muscle cell
  • pericyte
  • macrophage
  • mesothelial cell of epicardium
  • cardiac neuron
  • endocardial cell
  • lymphocyte
  • adipocyte
snATAC-seq in heart left ventricle (DETRF594WKI / ENCSR594WKI)

Male adult (68 years) - DETDR076AMT / ENCDO076AMT

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • lymphocyte
  • cardiac neuron
  • pericyte
  • macrophage
  • smooth muscle cell
  • mast cell
  • endocardial cell
  • mesothelial cell of epicardium
snATAC-seq in heart left ventricle (DETRF617IKC / ENCSR617IKC)

Male adult (58 years) - DETDR971VRE / ENCDO971VRE

Annotated reference cell types:

  • cardiac muscle cell
  • pericyte
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • endocardial cell
  • macrophage
  • smooth muscle cell
  • cardiac neuron
  • lymphocyte
  • mast cell
snATAC-seq in heart left ventricle (DETRF627IOJ / ENCSR627IOJ)

Male adult (41 years) - DETDR182VFD / ENCDO182VFD

Annotated reference cell types:

  • smooth muscle cell
  • cardiac muscle cell
  • pericyte
  • cardiac ventricle fibroblast
  • macrophage
  • cardiac endothelial cell
  • cardiac neuron
  • mast cell
  • lymphocyte
  • endocardial cell
snATAC-seq in heart left ventricle (DETRF642ZIC / ENCSR642ZIC)

Male adult (66 years) - DETDR308XYT / ENCDO308XYT

Annotated reference cell types:

  • cardiac endothelial cell
  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • cardiac neuron
  • pericyte
  • macrophage
  • endocardial cell
  • lymphocyte
  • smooth muscle cell
  • mast cell
  • adipocyte
  • mesothelial cell of epicardium
snATAC-seq in heart left ventricle (DETRF657WLS / ENCSR657WLS)

Male adult (25 years) - DETDR189VVY / ENCDO189VVY

Annotated reference cell types:

  • cardiac muscle cell
  • mast cell
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • macrophage
  • pericyte
  • smooth muscle cell
  • endocardial cell
  • cardiac neuron
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF668XPI / ENCSR668XPI)

Male adult (66 years) - DETDR529CYH / ENCDO529CYH

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • lymphocyte
  • pericyte
  • smooth muscle cell
  • cardiac neuron
  • adipocyte
  • cardiac endothelial cell
  • macrophage
  • mast cell
  • endocardial cell
snATAC-seq in heart left ventricle (DETRF686FZG / ENCSR686FZG)

Male adult (44 years) - DETDR107KXS / ENCDO107KXS

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac neuron
  • cardiac endothelial cell
  • macrophage
  • pericyte
  • mast cell
  • cardiac ventricle fibroblast
snATAC-seq in heart left ventricle (DETRF701JAT / ENCSR701JAT)

Male adult (65 years) - DETDR240MDH / ENCDO240MDH

Annotated reference cell types:

  • cardiac muscle cell
  • mesothelial cell of epicardium
  • cardiac ventricle fibroblast
  • cardiac neuron
  • mast cell
  • endocardial cell
  • pericyte
snATAC-seq in heart left ventricle (DETRF702ELN / ENCSR702ELN)

Male adult (30 years) - DETDR751PQQ / ENCDO751PQQ

Annotated reference cell types:

  • macrophage
  • cardiac ventricle fibroblast
  • cardiac muscle cell
  • pericyte
  • smooth muscle cell
  • cardiac endothelial cell
  • endocardial cell
  • mast cell
  • cardiac neuron
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF704SKG / ENCSR704SKG)

Female adult (53 years) - DETDR793LXB / ENCDO793LXB

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • macrophage
  • smooth muscle cell
snATAC-seq in heart left ventricle (DETRF718YPN / ENCSR718YPN)

Female adult (59 years) - DETDR522PCG / ENCDO522PCG

Annotated reference cell types:

  • cardiac endothelial cell
  • cardiac muscle cell
  • pericyte
  • cardiac ventricle fibroblast
  • macrophage
  • endocardial cell
  • lymphocyte
  • mast cell
  • cardiac neuron
  • smooth muscle cell
  • mesothelial cell of epicardium
  • adipocyte