Deconvolution summary for DETBK037GFN (ENCSR037GFN )

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Processing
Tissue:
gastroesophageal sphincter
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Reference sample

Status:
Released
Pair type:
Different donor(s), same tissue
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK037GFN 1 DETFL643XXF Released
peak calls of the bulk library DETBK037GFN 1 DETFL320WXW Released
fragments DETRF215BTH - DETFL162LPO Released
cell type data DETRF215BTH - DETFL476SQE Released

File type Cell type File accession File status
deconvoluted plus strand signal T cell DETFL592QDN Under Review
deconvoluted plus strand signal vascular smooth muscle cell DETFL601SGP Under Review
deconvoluted plus strand signal myofibroblast DETFL084JCA Under Review
deconvoluted plus strand signal fibroblast DETFL147XIV Under Review
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC