Deconvolution summary for DETBK063HOI (ENCSR063HOI )

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
stomach
Donor:
Male adult (54 years) - DETDR451RUA / ENCDO451RUA
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Male adult (54 years) - DETDR451RUA / ENCDO451RUA
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK063HOI 1 DETFL946MPF Released
peak calls of the bulk library DETBK063HOI 1 DETFL797XVL Released
fragments DETRF549JEQ - DETFL103XHP Released
cell type data DETRF549JEQ - DETFL824UIX Released

File type Cell type File accession File status
deconvoluted plus strand signal macrophage DETFL541NUX Released
deconvoluted plus strand signal T cell DETFL207XXL Released
deconvoluted plus strand signal endothelial cell DETFL848HXB Released
deconvoluted plus strand signal luminal epithelial cell DETFL098XMA Released
deconvoluted plus strand signal smooth muscle cell DETFL829YYA Released
deconvoluted plus strand signal gastric chief cell DETFL556VOT Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC