Deconvolution summary for DETBK229KWP (ENCSR229KWP )

Bulk sequencing sample
Assay:
H3K4me1 Histone ChIP-seq (Quality: )
Status:
Processing
Tissue:
esophagus muscularis mucosa
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK229KWP 1 DETFL124XGA Released
peak calls of the bulk library DETBK229KWP 1 DETFL908FXI Released
fragments DETRF168TFI - DETFL949QMG Released
cell type data DETRF168TFI - DETFL435PEG Released

File type Cell type File accession File status
deconvoluted plus strand signal macrophage DETFL595WZT Under Review
deconvoluted plus strand signal T cell DETFL280NHS Under Review
deconvoluted plus strand signal endothelial cell DETFL861AVW Under Review
deconvoluted plus strand signal vascular smooth muscle cell DETFL784ZZP Under Review
deconvoluted plus strand signal epithelial cell DETFL901MEP Under Review
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC