Deconvolution summary for DETBK480WMC (ENCSR480WMC )

Bulk sequencing sample
Assay:
H3K4me1 Histone ChIP-seq (Quality: )
Status:
Processing
Tissue:
placenta
Donor:
Male embryonic (16 weeks) - DETDR150YZC / ENCDO150YZC
Reference sample

Status:
Released
Pair type:
Different donor(s), same tissue
Donor:
Male embryonic (unknown unknown) - DETDR023YQQ / ENCDO023YQQ

Status:
Released
Pair type:
Different donor(s), same tissue
Donor:
Male embryonic (unknown unknown) - DETDR384FEJ / ENCDO384FEJ
Deconvolution

File type Experiment Replicate File accession File status
peak calls of the bulk library DETBK480WMC 1 DETFL591GYR Released
fragments DETRF029KFQ - DETFL043WJS Released
cell type data DETRF029KFQ - DETFL657RSC Released
fragments DETRF207ABL - DETFL504FQS Released
cell type data DETRF207ABL - DETFL657RSC Released

File type Cell type File accession File status
deconvoluted plus strand signal immune cell DETFL645OTZ Under Review
deconvoluted plus strand signal syncytiotrophoblast cell DETFL875NQO Under Review
deconvoluted plus strand signal endothelial cell DETFL430CCY Under Review
deconvoluted plus strand signal Hofbauer immune cells DETFL850BWE Under Review
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC