Deconvolution summary for DETBK489ZLL (ENCSR489ZLL )

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
stomach
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK489ZLL 1 DETFL437YMJ Released
peak calls of the bulk library DETBK489ZLL 1 DETFL588TFE Released
fragments DETRF940QRM - DETFL423EAR Released
cell type data DETRF940QRM - DETFL323QZR Released

File type Cell type File accession File status
deconvoluted plus strand signal macrophage DETFL606VIO Released
deconvoluted plus strand signal T cell DETFL225ADJ Released
deconvoluted plus strand signal fibroblast DETFL474CER Released
deconvoluted plus strand signal luminal epithelial cell DETFL187TCR Released
deconvoluted plus strand signal gastric chief cell DETFL634VDX Released
deconvoluted plus strand signal gastric parietal cell DETFL244EGG Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC