Deconvolution summary for DETBK508UPW (ENCSR508UPW )

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Processing
Tissue:
esophagus squamous epithelium
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK508UPW 1 DETFL117IKR Released
peak calls of the bulk library DETBK508UPW 1, 2 DETFL313UUQ Released
alignments of the bulk library DETBK508UPW 2 DETFL088NXG Released
fragments DETRF164GSH - DETFL815ESF Released
cell type data DETRF164GSH - DETFL692JNB Released

File type Cell type File accession File status
deconvoluted plus strand signal macrophage DETFL758TOZ Under Review
deconvoluted plus strand signal T cell DETFL051PYG Under Review
deconvoluted plus strand signal fibroblast DETFL179QTL Under Review
deconvoluted plus strand signal luminal epithelial cell DETFL203MPV Under Review
deconvoluted plus strand signal basal epithelial cell DETFL050KVG Under Review
deconvoluted plus strand signal goblet cell DETFL923SCW Under Review
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC