Deconvolution summary for DETBK525JJM (ENCSR525JJM )

This page summarizes the bulk assay, matched reference sample, downloadable files, and deconvolved cell-type-specific genome browser tracks generated by DeepDETAILS.

Bulk sequencing sample
Assay:
H3K4me1 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
esophagus muscularis mucosa
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Deconvolution

File type Experiment Replicate File accession File status
peak calls of the bulk library DETBK525JJM 1 DETFL305JXM Released
alignments of the bulk library DETBK525JJM 1 DETFL903VHY Released
fragments DETRF871CTA - DETFL958CLN Released
cell type data DETRF871CTA - DETFL622QRX Released

File type Cell type File accession File status
deconvoluted plus strand signal endothelial cell DETFL132RNF Released
deconvoluted plus strand signal mast cell DETFL023QLB Released
deconvoluted plus strand signal myofibroblast DETFL965ZUG Released
deconvoluted plus strand signal vascular smooth muscle cell DETFL723MCF Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC