Deconvolution summary for DETBK872WVR (ENCSR872WVR )

Bulk sequencing sample
Assay:
H3K4me1 Histone ChIP-seq (Quality: )
Status:
Processing
Tissue:
gastroesophageal sphincter
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK872WVR 1 DETFL633YNF Released
peak calls of the bulk library DETBK872WVR 1, 2 DETFL060JHQ Released
alignments of the bulk library DETBK872WVR 2 DETFL093ESS Released
fragments DETRF215BTH - DETFL162LPO Released
cell type data DETRF215BTH - DETFL476SQE Released

File type Cell type File accession File status
deconvoluted plus strand signal endothelial cell DETFL131PMW Under Review
deconvoluted plus strand signal vascular smooth muscle cell DETFL104ADJ Under Review
deconvoluted plus strand signal myofibroblast DETFL631OAW Under Review
deconvoluted plus strand signal fibroblast DETFL839LGC Under Review
deconvoluted plus strand signal smooth muscle cell DETFL217MRI Under Review
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC