Deconvolution summary for DETBK900UIP (ENCSR900UIP )

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Released
Tissue:
sigmoid colon
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Female adult (53 years) - DETDR793LXB / ENCDO793LXB
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK900UIP 1 DETFL640ALC Released
peak calls of the bulk library DETBK900UIP 1 DETFL530UBK Released
fragments DETRF388NCA - DETFL994HOW Released
cell type data DETRF388NCA - DETFL680ABE Released

File type Cell type File accession File status
deconvoluted plus strand signal macrophage DETFL289IFE Released
deconvoluted plus strand signal endothelial cell DETFL023CED Released
deconvoluted plus strand signal vascular smooth muscle cell DETFL463OZF Released
deconvoluted plus strand signal Schwann cell DETFL458GJU Released
deconvoluted plus strand signal tuft cell DETFL741OLP Released
deconvoluted plus strand signal myofibroblast DETFL595ZUG Released
deconvoluted plus strand signal smooth muscle cell DETFL173ZVF Released
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC