Deconvolution summary for DETBK960AAL (ENCSR960AAL )

Bulk sequencing sample
Assay:
H3K4me3 Histone ChIP-seq (Quality: )
Status:
Processing
Tissue:
sigmoid colon
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Reference sample

Status:
Released
Pair type:
Same donor, same organ, different locations
Donor:
Male adult (37 years) - DETDR845WKR / ENCDO845WKR
Deconvolution

File type Experiment Replicate File accession File status
alignments of the bulk library DETBK960AAL 1 DETFL204KGR Released
peak calls of the bulk library DETBK960AAL 1 DETFL250ZHO Released
fragments DETRF367GKP - DETFL010JFQ Released
cell type data DETRF367GKP - DETFL377GVQ Released

File type Cell type File accession File status
deconvoluted plus strand signal macrophage DETFL758VFO Under Review
deconvoluted plus strand signal vascular smooth muscle cell DETFL067OVT Under Review
deconvoluted plus strand signal Schwann cell DETFL497SUH Under Review
deconvoluted plus strand signal fibroblast DETFL003QHI Under Review
deconvoluted plus strand signal smooth muscle cell DETFL258MGO Under Review
Marker enrichment analysis
Provide marker genes for each cell type and compute enrichment of target-cell-type signal versus all other cell types.
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Results
Cell type Marker gene LFC