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Compendium
DeepDETAILS Compendium
Assay
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PRO-cap
PRO-seq
H3K27ac Histone ChIP-seq
H3K4me3 Histone ChIP-seq
H3K4me1 Histone ChIP-seq
Tissue
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Peyer patch
Right ventricle myocardium inferior
Right ventricle myocardium superior
adrenal gland
ascending aorta
bile duct
body of pancreas
breast epithelium
colonic mucosa
esophagus mucosa
esophagus muscularis mucosa
esophagus squamous epithelium
fallopian tube
gastrocnemius
gastrocnemius medialis
gastroesophageal sphincter
heart
heart left ventricle
heart right ventricle
layer of hippocampus
left cardiac atrium
left cerebral cortex
left colon
left lobe of liver
left lung
left ventricle myocardium inferior
left ventricle myocardium superior
lower leg skin
lower lobe of left lung
lower lobe of right lung
lung
mucosa of descending colon
omental fat pad
ovary
pancreas
placenta
psoas muscle
right atrium auricular region
right cardiac atrium
right lobe of liver
sigmoid colon
stomach
suprapubic skin
thoracic aorta
thyroid gland
tibial artery
tibial nerve
transverse colon
upper lobe of left lung
upper lobe of right lung
ureter
uterus
vagina
Cell type
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hepatocyte - hepatocyte - CL:0000182
hepatic stellate cell - fibroblast - CL:0000632
macrophage - macrophage - CL:0000235
cholangiocyte - cholangiocyte - CL:1000488
T cell - T cell - CL:0000084
endothelial cell - endothelial cell - CL:0000115
type I cell of adrenal cortex - zona glomerulosa cell - CL:0002099
type II cell of adrenal cortex - zona fasciculata cell - CL:0002136
type III cell of adrenal cortex - zona reticularis cell - CL:0002137
adrenal medulla chromaffin cell - adrenal medulla chromaffin cell - CL:0000336
endothelial cell of lymphatic vessel - lymphatic endothelial cell - CL:0002138
vascular associated smooth muscle cell - vascular smooth muscle cell - CL:0000359
Schwann cell - Schwann cell - CL:0002573
mesenchymal cell - mesenchymal cell - CL:0008019
leukocyte - immune cell - CL:0000738
cortical cell of adrenal gland - adrenal cortical cell - CL:0002097
neuroblast (sensu Vertebrata) - late neuroblast - CL:0000031
goblet cell - immature goblet cell - CL:0000160
transit amplifying cell of colon - transit-amplifying cell - CL:0009011
BEST4+ enteroycte - BEST4+ enterocyte - CL:4030026
enterocyte - immature enterocyte - CL:0000584
colon goblet cell - goblet cell - CL:0009039
intestinal crypt stem cell of colon - colon stem cell - CL:0009043
tuft cell of colon - tuft cell - CL:0009041
enterocyte - enterocyte - CL:0000584
enteroendocrine cell - enteroendocrine cell - CL:0000164
B cell - B cell - CL:0000236
plasma cell - plasma cell - CL:0000786
myeloid cell - myeloid cell - CL:0000763
mast cell - mast cell - CL:0000097
natural killer cell - natural killer cell - CL:0000623
innate lymphoid cell - innate lymphoid cell - CL:0001065
macrophage - myeloid cell - CL:0000235
fibroblast - crypt fibroblast - CL:0000057
myofibroblast cell - myofibroblast - CL:0000186
fibroblast - WNT5B+ villus fibroblast - CL:0000057
neural cell - neural cell - CL:0002319
pericyte - pericyte - CL:0000669
interstitial cell of Cajal - interstitial cell of cajal - CL:0002088
type I muscle cell - type 1 skeletal myocyte - CL:0002211
type II muscle cell - type 2 skeletal myocyte - CL:0002212
fibroblast - fibroblast - CL:0000057
skeletal muscle satellite cell - myosatellite - CL:0000594
epithelial cell - luminal epithelial cell - CL:0000066
epithelial cell - basal epithelial cell - CL:0000066
smooth muscle cell - smooth muscle cell - CL:0000192
cardiac endothelial cell - endothelial cell - CL:0010008
acinar cell - acinar cell - CL:0000622
pancreatic ductal cell - ductal cell - CL:0002079
epithelial cell of esophagus - epithelial cell - CL:0002252
goblet cell - goblet cell - CL:0000160
cardiac muscle cell - cardiomyocyte - CL:0000746
cardiac ventricle fibroblast - fibroblast - CL:2000066
adipocyte - adipocyte - CL:0000136
mesothelial cell - mesothelial cell - CL:0000077
cardiac atrium fibroblast - fibroblast - CL:2000067
mesothelial cell of epicardium - mesothelial cell - CL:0011019
hepatic stellate cell - hepatic stellate cell - CL:0000632
peptic cell - gastric chief cell - CL:0000155
gastric goblet cell - goblet cell - CL:1000313
parietal cell - gastric parietal cell - CL:0000162
endothelial cell of artery - endothelial cell - CL:1000413
thyroid follicular cell - follicular cell - CL:0002258
enterocyte - enterocyte absorptive cell - CL:0000584
colon epithelial cell - epithelial cell - CL:0011108
pulmonary alveolar type 2 cell - type 2 pneumocyte - CL:0002063
blood vessel endothelial cell - endothelial cell - CL:0000071
peripheral nervous system neuron - nerve cell - CL:2000032
hepatic portal fibroblast - fibroblast - CL:0009100
monocyte - monocyte - CL:0000576
erythroblast - erythroblast - CL:0000765
stromal cell - pancreatic cell - CL:0000499
fallopian tube secretory epithelial cell - epithelial secretory cell - CL:4030006
fallopian tube ciliated cell - epithelial ciliated cell - CL:4030007
lymphocyte - lymphocyte - CL:0000542
stromal cell of ovary - ovarian stromal cell - CL:0002132
vascular associated smooth muscle cell - perivascular cell - CL:0000359
uterine smooth muscle cell - smooth muscle cell - CL:0002601
stromal cell - uterine stromal cell - CL:0000499
neutrophil - neutrophil - CL:0000775
basal cell of urothelium - urothelial basal cell - CL:1000486
ureter urothelial cell - urothelial intermediate cell - CL:1000706
ureter urothelial cell - urothelial umbrella cell - CL:1000706
type I muscle cell - type 1 muscle cell - CL:0002211
type II muscle cell - type 2 muscle cell - CL:0002212
fibro/adipogenic progenitor cell - fibroadipogenic progenitor cell - CL:0009099
skeletal muscle satellite cell - muscle satellite cell - CL:0000594
muscle cell - muscle cell - CL:0000187
acinar cell - pancreatic acinar cell - CL:0000622
pancreatic stellate cell - stellate cell - CL:0002410
alpha cell, gamma cell, epsilon cell - alpha cell, gamma cell, epsilon cell - CL:0000171, CL:0005019, CL:0002275
type B pancreatic cell - beta cell - CL:0000169
pancreatic PP cell - gamma cell - CL:0002275
pulmonary alveolar type 1 cell - alveolar type 1 cell - CL:0002062
alveolar capillary type 1 endothelial cell - general capillary cell - CL:4028002
pulmonary alveolar type 2 cell - alveolar type 2 cell - CL:0002063
alveolar fibroblast - alveolar fibroblast - CL:4028004, CL:4028006
endothelial cell of lymphatic vessel - lymphatic cell - CL:0002138
respiratory basal cell - basal cell - CL:0002633
alveolar adventitial fibroblast - adventitial fibroblast - CL:4028006
endothelial cell of artery - endothelial cell of artery - CL:1000413
lung ciliated cell - ciliated cell - CL:1000271
vein endothelial cell - vein endothelial cell - CL:0002543
alveolar capillary type 2 endothelial cell - aerocyte - CL:4028003
epithelial cell of lung - cycling cell - CL:0000082
tracheobronchial smooth muscle cell - airway smooth muscle cell - CL:0019019
endocardial cell - endocardial cell - CL:0002350
cardiac neuron - neuronal cell - CL:0010022
fibroblast - fibroblast - nan
basal cell - basal cell - CL:0000646
syncytiotrophoblast cell - syncytiotrophoblast cell - CL:0000525
endothelial cell of placenta - endothelial cell - CL:0009092
placental villous trophoblast - placental villous trophoblast - CL:2000060
Hofbauer cell - Hofbauer immune cells - CL:3000001
fibroblast of cardiac tissue - cardiac fibroblast - CL:0002548
fibroblast of cardiac tissue - fibroblast - CL:0002548
stromal cell - adrenal stromal cell - CL:0000499
mesenchymal cell - adrenal capsule cell - CL:0008019
adrenal medulla chromaffin cell - Sox10+ adrenal medulla progenitor cell - CL:0000336
cell of skeletal muscle - skeletal muscle cell - CL:0000188
glutamatergic neuron - excitatory neuron - CL:0000679
GABAergic interneuron - inhibitory neuron - CL:0011005
astrocyte - astrocyte - CL:0000127
oligodendrocyte precursor cell - oligodendrocyte precursor cell - CL:0002453
vascular leptomeningeal cell - vascular leptomeningeal cell - CL:4023051
oligodendrocyte - oligodendrocyte - CL:0000128
microglial cell - microglial cell - CL:0000129
ependymal cell - ependymal cell - CL:0000065
cardiac endothelial cell - cardiac endothelial cell - CL:0010008
mesothelial cell of epicardium - epicardial cell - CL:0011019
type IIb muscle cell - type 2B muscle cell - CL:0002215
type II muscle cell - type 2X muscle cell - CL:0002212
tendon cell - tenocyte - CL:0000388
cell of skeletal muscle - muscle satellite cell - CL:0000188
fibroadipogenic progenitor cell - fibroadipogenic progenitor cell - FCL:0000136
cell of skeletal muscle - myotendinous junction nucleus - CL:0000188
cell of skeletal muscle - neuromuscular junction nucleus - CL:0000188
cell of skeletal muscle - perinatal muscle cell - CL:0000188
type IIa muscle cell - type 2A muscle cell - CL:0002214
Filter
H3K4me1 Histone ChIP-seq in colonic mucosa (DETBK313DUH / ENCSR313DUH)
Female adult (41 years) - DETDR575WHY / ENCDO575WHY
Deconvoluted cell types:
goblet cell
BEST4+ enteroycte
enterocyte
colon goblet cell
intestinal crypt stem cell of colon
tuft cell of colon
enterocyte
enteroendocrine cell
B cell
macrophage
fibroblast
H3K27ac Histone ChIP-seq in colonic mucosa (DETBK078LIZ / ENCSR078LIZ)
Female adult (41 years) - DETDR575WHY / ENCDO575WHY
Deconvoluted cell types:
T cell
goblet cell
transit amplifying cell of colon
BEST4+ enteroycte
enterocyte
colon goblet cell
intestinal crypt stem cell of colon
tuft cell of colon
fibroblast
H3K4me3 Histone ChIP-seq in colonic mucosa (DETBK574USP / ENCSR574USP)
Female adult (41 years) - DETDR575WHY / ENCDO575WHY
Deconvoluted cell types:
T cell
goblet cell
transit amplifying cell of colon
BEST4+ enteroycte
enterocyte
colon goblet cell
intestinal crypt stem cell of colon
tuft cell of colon
B cell
fibroblast
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