DeepDETAILS Reference Samples

Reference samples provide the annotated single-cell and single-nucleus ATAC-seq profiles used to assign bulk regulatory signals to specific cell types.

snATAC-seq in heart left ventricle (DETRF020FAW / ENCSR020FAW)

Male adult (21 years) - DETDR934DRK / ENCDO934DRK

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • cardiac ventricle fibroblast
  • endocardial cell
  • macrophage
  • lymphocyte
  • mast cell
  • smooth muscle cell
  • cardiac neuron
  • pericyte
snATAC-seq in heart left ventricle (DETRF033ENA / ENCSR033ENA)

Male adult (45 years) - DETDR894OKI / ENCDO894OKI

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • macrophage
  • cardiac endothelial cell
  • cardiac neuron
  • endocardial cell
  • smooth muscle cell
  • mast cell
  • pericyte
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF051ECW / ENCSR051ECW)

Male adult (55 years) - DETDR865TFF / ENCDO865TFF

Annotated reference cell types:

  • cardiac muscle cell
  • smooth muscle cell
  • cardiac neuron
  • cardiac endothelial cell
  • macrophage
  • pericyte
  • cardiac ventricle fibroblast
  • lymphocyte
  • mesothelial cell of epicardium
  • endocardial cell
  • adipocyte
snATAC-seq in heart left ventricle (DETRF061BEN / ENCSR061BEN)

Male adult (61 years) - DETDR229CTV / ENCDO229CTV

Annotated reference cell types:

  • macrophage
  • cardiac neuron
  • cardiac ventricle fibroblast
  • lymphocyte
  • cardiac endothelial cell
  • cardiac muscle cell
  • pericyte
  • smooth muscle cell
  • endocardial cell
  • mesothelial cell of epicardium
  • mast cell
snATAC-seq in heart left ventricle (DETRF079TCC / ENCSR079TCC)

Male adult (68 years) - DETDR239INK / ENCDO239INK

Annotated reference cell types:

  • cardiac muscle cell
  • mesothelial cell of epicardium
  • mast cell
  • cardiac endothelial cell
  • cardiac ventricle fibroblast
  • macrophage
snATAC-seq in heart left ventricle (DETRF080TZR / ENCSR080TZR)

Male adult (69 years) - DETDR477WED / ENCDO477WED

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • fibroblast of cardiac tissue
  • pericyte
  • macrophage
  • lymphocyte
  • smooth muscle cell
  • mesothelial cell of epicardium
  • cardiac neuron
  • endocardial cell
snATAC-seq in heart left ventricle (DETRF084DVM / ENCSR084DVM)

Male adult (20 years) - DETDR061UFT / ENCDO061UFT

Annotated reference cell types:

  • cardiac muscle cell
  • macrophage
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • smooth muscle cell
  • pericyte
  • mesothelial cell of epicardium
  • lymphocyte
  • cardiac neuron
snATAC-seq in heart left ventricle (DETRF088ZOL / ENCSR088ZOL)

Male adult (31 years) - DETDR862XAV / ENCDO862XAV

Annotated reference cell types:

  • cardiac muscle cell
  • pericyte
  • cardiac ventricle fibroblast
  • macrophage
  • cardiac endothelial cell
  • cardiac neuron
  • mast cell
  • smooth muscle cell
  • endocardial cell
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF101LQQ / ENCSR101LQQ)

Male adult (64 years) - DETDR446FXE / ENCDO446FXE

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • pericyte
  • cardiac neuron
  • cardiac endothelial cell
  • mast cell
  • macrophage
  • lymphocyte
  • smooth muscle cell
  • mesothelial cell of epicardium
snATAC-seq in heart left ventricle (DETRF131DKN / ENCSR131DKN)

Female adult (46 years) - DETDR411EVD / ENCDO411EVD

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • macrophage
  • cardiac endothelial cell
  • smooth muscle cell
  • pericyte
  • lymphocyte
  • adipocyte
  • cardiac neuron
  • endocardial cell
  • mast cell
snATAC-seq in heart left ventricle (DETRF161IHV / ENCSR161IHV)

Male adult (57 years) - DETDR639HZG / ENCDO639HZG

Annotated reference cell types:

  • pericyte
  • macrophage
  • cardiac ventricle fibroblast
  • cardiac muscle cell
  • cardiac endothelial cell
  • endocardial cell
  • cardiac neuron
  • mast cell
  • mesothelial cell of epicardium
  • smooth muscle cell
  • lymphocyte
  • adipocyte
snATAC-seq in heart left ventricle (DETRF173UUN / ENCSR173UUN)

Male adult (65 years) - DETDR187SDN / ENCDO187SDN

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac neuron
  • cardiac ventricle fibroblast
  • smooth muscle cell
  • cardiac endothelial cell
  • macrophage
  • endocardial cell
  • pericyte
  • mast cell
  • adipocyte
  • lymphocyte
  • mesothelial cell of epicardium
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