DeepDETAILS Reference Samples

Reference samples provide the annotated single-cell and single-nucleus ATAC-seq profiles used to assign bulk regulatory signals to specific cell types.

snATAC-seq in heart left ventricle (DETRF175JHG / ENCSR175JHG)

Male adult (39 years) - DETDR266KDE / ENCDO266KDE

Annotated reference cell types:

  • pericyte
  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • cardiac neuron
  • macrophage
  • lymphocyte
  • mast cell
snATAC-seq in heart left ventricle (DETRF185NXG / ENCSR185NXG)

Female adult (50 years) - DETDR166SII / ENCDO166SII

Annotated reference cell types:

  • cardiac muscle cell
  • endocardial cell
  • cardiac ventricle fibroblast
  • pericyte
  • macrophage
  • cardiac endothelial cell
  • adipocyte
  • cardiac neuron
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF233KYH / ENCSR233KYH)

Female adult (61 years) - DETDR650FUH / ENCDO650FUH

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • macrophage
  • mast cell
  • cardiac endothelial cell
  • cardiac neuron
  • endocardial cell
  • pericyte
  • smooth muscle cell
  • lymphocyte
  • mesothelial cell of epicardium
snATAC-seq in heart left ventricle (DETRF270CUT / ENCSR270CUT)

Male adult (63 years) - DETDR208BPU / ENCDO208BPU

Annotated reference cell types:

  • cardiac muscle cell
  • endocardial cell
  • macrophage
  • pericyte
  • cardiac endothelial cell
  • mast cell
  • cardiac ventricle fibroblast
  • smooth muscle cell
  • cardiac neuron
  • lymphocyte
  • mesothelial cell of epicardium
snATAC-seq in heart left ventricle (DETRF273DAC / ENCSR273DAC)

Male adult (62 years) - DETDR768WUT / ENCDO768WUT

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • mesothelial cell of epicardium
  • macrophage
  • lymphocyte
  • cardiac endothelial cell
  • mast cell
  • smooth muscle cell
  • pericyte
  • cardiac neuron
  • endocardial cell
  • adipocyte
snATAC-seq in heart left ventricle (DETRF277LDY / ENCSR277LDY)

Male adult (73 years) - DETDR804CLC / ENCDO804CLC

Annotated reference cell types:

  • cardiac endothelial cell
  • cardiac muscle cell
  • mesothelial cell of epicardium
  • fibroblast of cardiac tissue
  • endocardial cell
  • pericyte
  • macrophage
  • lymphocyte
  • smooth muscle cell
snATAC-seq in heart left ventricle (DETRF280RVT / ENCSR280RVT)

Male adult (43 years) - DETDR738SLM / ENCDO738SLM

Annotated reference cell types:

  • macrophage
  • cardiac muscle cell
  • pericyte
  • cardiac endothelial cell
  • cardiac ventricle fibroblast
  • cardiac neuron
  • smooth muscle cell
  • mast cell
  • lymphocyte
  • endocardial cell
snATAC-seq in heart left ventricle (DETRF288RQI / ENCSR288RQI)

Male adult (55 years) - DETDR439CAZ / ENCDO439CAZ

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • fibroblast of cardiac tissue
  • pericyte
  • smooth muscle cell
  • endocardial cell
  • macrophage
  • cardiac neuron
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF305KUV / ENCSR305KUV)

Female adult (68 years) - DETDR435KUZ / ENCDO435KUZ

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • cardiac ventricle fibroblast
  • macrophage
  • cardiac neuron
  • endocardial cell
  • pericyte
  • smooth muscle cell
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF318ERF / ENCSR318ERF)

Female adult (59 years) - DETDR856ZOJ / ENCDO856ZOJ

Annotated reference cell types:

  • cardiac muscle cell
  • pericyte
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • macrophage
  • smooth muscle cell
  • endocardial cell
  • lymphocyte
  • cardiac neuron
  • adipocyte
  • mast cell
snATAC-seq in heart left ventricle (DETRF320QOP / ENCSR320QOP)

Male adult (30 years) - DETDR377SFB / ENCDO377SFB

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • macrophage
  • pericyte
  • cardiac endothelial cell
  • cardiac neuron
  • mast cell
  • smooth muscle cell
  • endocardial cell
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF321AHR / ENCSR321AHR)

Male adult (62 years) - DETDR110LFV / ENCDO110LFV

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • cardiac neuron
  • cardiac endothelial cell
  • pericyte
  • macrophage
  • smooth muscle cell
  • adipocyte
  • endocardial cell
  • mast cell
  • mesothelial cell of epicardium
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