DeepDETAILS Reference Samples

Reference samples provide the annotated single-cell and single-nucleus ATAC-seq profiles used to assign bulk regulatory signals to specific cell types.


snATAC-seq in heart left ventricle (DETRF406CJH / ENCSR406CJH)

Male adult (68 years) - DETDR184BIH / ENCDO184BIH

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • smooth muscle cell
  • macrophage
  • endocardial cell
  • pericyte
  • mast cell
  • cardiac neuron
  • lymphocyte
  • adipocyte
snATAC-seq in heart left ventricle (DETRF409QLZ / ENCSR409QLZ)

Female adult (47 years) - DETDR121UJI / ENCDO121UJI

Annotated reference cell types:

  • macrophage
  • mesothelial cell of epicardium
  • cardiac muscle cell
  • fibroblast of cardiac tissue
  • cardiac endothelial cell
  • lymphocyte
  • pericyte
  • smooth muscle cell
  • cardiac neuron
snATAC-seq in heart left ventricle (DETRF412VTJ / ENCSR412VTJ)

Male adult (54 years) - DETDR593PZY / ENCDO593PZY

Annotated reference cell types:

  • cardiac endothelial cell
  • cardiac muscle cell
  • adipocyte
  • endocardial cell
  • cardiac neuron
  • macrophage
  • cardiac ventricle fibroblast
  • mesothelial cell of epicardium
  • pericyte
  • lymphocyte
  • smooth muscle cell
  • mast cell
snATAC-seq in heart left ventricle (DETRF435CGY / ENCSR435CGY)

Male adult (41 years) - DETDR216BMM / ENCDO216BMM

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • macrophage
  • cardiac ventricle fibroblast
  • mesothelial cell of epicardium
  • lymphocyte
  • adipocyte
  • mast cell
  • cardiac neuron
  • endocardial cell
  • smooth muscle cell
  • pericyte
snATAC-seq in heart left ventricle (DETRF450VTB / ENCSR450VTB)

Male adult (67 years) - DETDR269PFV / ENCDO269PFV

Annotated reference cell types:

  • cardiac muscle cell
  • mesothelial cell of epicardium
  • cardiac ventricle fibroblast
  • macrophage
  • cardiac neuron
  • cardiac endothelial cell
  • pericyte
  • endocardial cell
  • smooth muscle cell
  • lymphocyte
  • mast cell
snATAC-seq in heart left ventricle (DETRF494FFG / ENCSR494FFG)

Female adult (42 years) - DETDR423HZU / ENCDO423HZU

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac neuron
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • smooth muscle cell
  • macrophage
  • mast cell
  • pericyte
  • endocardial cell
snATAC-seq in heart left ventricle (DETRF495SMB / ENCSR495SMB)

Female adult (32 years) - DETDR739PAW / ENCDO739PAW

Annotated reference cell types:

  • cardiac endothelial cell
  • macrophage
  • adipocyte
  • endocardial cell
  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • lymphocyte
  • mesothelial cell of epicardium
  • cardiac neuron
  • smooth muscle cell
  • pericyte
  • mast cell
snATAC-seq in heart left ventricle (DETRF506ROZ / ENCSR506ROZ)

Male adult (58 years) - DETDR545EJY / ENCDO545EJY

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • smooth muscle cell
  • cardiac ventricle fibroblast
  • pericyte
  • macrophage
  • cardiac neuron
  • lymphocyte
  • mast cell
  • endocardial cell
snATAC-seq in heart left ventricle (DETRF511VYN / ENCSR511VYN)

Female adult (48 years) - DETDR817MDD / ENCDO817MDD

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • pericyte
  • cardiac neuron
  • macrophage
  • adipocyte
  • cardiac endothelial cell
  • endocardial cell
  • smooth muscle cell
  • mast cell
snATAC-seq in heart left ventricle (DETRF531ZKI / ENCSR531ZKI)

Male adult (68 years) - DETDR038QFX / ENCDO038QFX

Annotated reference cell types:

  • cardiac endothelial cell
  • cardiac muscle cell
  • lymphocyte
  • cardiac ventricle fibroblast
  • pericyte
  • adipocyte
  • macrophage
  • smooth muscle cell
  • cardiac neuron
  • mast cell
  • endocardial cell
snATAC-seq in heart left ventricle (DETRF538FPK / ENCSR538FPK)

Female adult (51 years) - DETDR271OUW / ENCDO271OUW

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • smooth muscle cell
  • cardiac endothelial cell
  • macrophage
  • T cell
snATAC-seq in heart left ventricle (DETRF546WZB / ENCSR546WZB)

Female adult (47 years) - DETDR280SCV / ENCDO280SCV

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • cardiac ventricle fibroblast
  • smooth muscle cell
  • adipocyte
  • pericyte
  • macrophage
  • lymphocyte
  • cardiac neuron
  • mast cell