DeepDETAILS Reference Samples

Reference samples provide the annotated single-cell and single-nucleus ATAC-seq profiles used to assign bulk regulatory signals to specific cell types.

snATAC-seq in heart left ventricle (DETRF951AID / ENCSR951AID)

Female adult (51 years) - DETDR068KYD / ENCDO068KYD

Annotated reference cell types:

  • cardiac muscle cell
  • smooth muscle cell
  • pericyte
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • endocardial cell
  • macrophage
  • mast cell
  • cardiac neuron
snATAC-seq in heart left ventricle (DETRF958FFE / ENCSR958FFE)

Male adult (37 years) - DETDR123GXG / ENCDO123GXG

Annotated reference cell types:

  • macrophage
  • pericyte
  • endocardial cell
  • cardiac muscle cell
  • smooth muscle cell
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • cardiac neuron
  • mast cell
  • lymphocyte
snATAC-seq in heart left ventricle (DETRF960IDI / ENCSR960IDI)

Male adult (69 years) - DETDR737TEG / ENCDO737TEG

Annotated reference cell types:

  • mesothelial cell of epicardium
  • cardiac muscle cell
  • cardiac ventricle fibroblast
  • cardiac endothelial cell
  • pericyte
  • smooth muscle cell
  • macrophage
  • lymphocyte
  • adipocyte
  • mast cell
  • cardiac neuron
  • endocardial cell
snATAC-seq in heart left ventricle (DETRF987PQH / ENCSR987PQH)

Male adult (32 years) - DETDR212WIV / ENCDO212WIV

Annotated reference cell types:

  • macrophage
  • cardiac muscle cell
  • pericyte
  • cardiac endothelial cell
  • smooth muscle cell
  • cardiac ventricle fibroblast
  • lymphocyte
  • endocardial cell
  • cardiac neuron
  • mast cell
snATAC-seq in heart right ventricle (DETRF169BCG / ENCSR169BCG)

Female adult (41 years) - DETDR575WHY / ENCDO575WHY

Annotated reference cell types:

  • cardiac ventricle fibroblast
  • cardiac muscle cell
  • lymphocyte
  • pericyte
  • cardiac endothelial cell
  • cardiac neuron
  • macrophage
  • mast cell
  • endocardial cell
  • adipocyte
  • smooth muscle cell
snATAC-seq in heart right ventricle (DETRF442RZO / ENCSR442RZO)

Male adult (61 years) - DETDR808ASZ / ENCDO808ASZ

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • lymphocyte
  • fibroblast of cardiac tissue
  • macrophage
  • adipocyte
  • smooth muscle cell
  • pericyte
  • endocardial cell
  • cardiac neuron
  • mast cell
  • mesothelial cell of epicardium
snATAC-seq in heart right ventricle (DETRF454YDZ / ENCSR454YDZ)

Male adult (54 years) - DETDR039RUH / ENCDO039RUH

Annotated reference cell types:

  • cardiac endothelial cell
  • cardiac muscle cell
  • fibroblast of cardiac tissue
  • pericyte
  • adipocyte
  • macrophage
  • mesothelial cell of epicardium
  • smooth muscle cell
  • lymphocyte
  • cardiac neuron
  • endocardial cell
snATAC-seq in heart right ventricle (DETRF517QNQ / ENCSR517QNQ)

Male adult (66 years) - DETDR926KEV / ENCDO926KEV

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • fibroblast of cardiac tissue
  • smooth muscle cell
  • endocardial cell
  • macrophage
  • pericyte
  • mesothelial cell of epicardium
  • cardiac neuron
  • lymphocyte
  • adipocyte
snATAC-seq in heart right ventricle (DETRF520ZUD / ENCSR520ZUD)

Male adult (73 years) - DETDR804CLC / ENCDO804CLC

Annotated reference cell types:

  • cardiac muscle cell
  • fibroblast of cardiac tissue
  • cardiac endothelial cell
  • adipocyte
  • mesothelial cell of epicardium
  • pericyte
  • macrophage
  • endocardial cell
  • smooth muscle cell
  • cardiac neuron
  • lymphocyte
snATAC-seq in heart right ventricle (DETRF534KYJ / ENCSR534KYJ)

Male adult (46 years) - DETDR014LAW / ENCDO014LAW

Annotated reference cell types:

  • cardiac muscle cell
  • cardiac endothelial cell
  • fibroblast of cardiac tissue
  • smooth muscle cell
  • endocardial cell
  • pericyte
  • mesothelial cell of epicardium
  • macrophage
  • cardiac neuron
  • adipocyte
  • mast cell
  • lymphocyte
snATAC-seq in heart right ventricle (DETRF579TPC / ENCSR579TPC)

Female adult (59 years) - DETDR856ZOJ / ENCDO856ZOJ

Annotated reference cell types:

  • cardiac muscle cell
  • fibroblast of cardiac tissue
  • smooth muscle cell
  • adipocyte
  • pericyte
  • cardiac neuron
  • macrophage
  • cardiac endothelial cell
  • mast cell
  • lymphocyte
  • endocardial cell
snATAC-seq in heart right ventricle (DETRF588PEE / ENCSR588PEE)

Female adult (46 years) - DETDR411EVD / ENCDO411EVD

Annotated reference cell types:

  • cardiac muscle cell
  • macrophage
  • cardiac endothelial cell
  • cardiac ventricle fibroblast
  • pericyte
  • cardiac neuron
  • smooth muscle cell
  • lymphocyte
  • endocardial cell
  • mast cell
  • adipocyte
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